My project has been more or less on hold for around a week because of exams and other stuff. Looking forward to getting some concrete things done now. While still reading up a bit on OWL, I've started taken the first steps of the prolog/blipkit integration with a simple method for querying a prolog on the form "subject, a predicate, and an object".
For my own documentation I went ahead and summarized all the steps I had to take
Finally got blipkit started from java via jpl :)
In order to get the jpl java examples to work, LD_LIBRARY_PATH has to contain:
/usr/lib/jvm/java-1.5.0-sun-1.5.0.19/jre/lib/i386/client/:/usr/lib/jvm/java-1.5.0-sun-1.5.0.19/jre/lib/i386/
/usr/local/lib/pl-5.7.15/lib/jpl.jar:/home/samuel/install/swi-prolog/pl57/packages/jpl/examples/java/Test
Now firing up blipkit works, when calling Java from commandline!!!
EDIT: Se solution at the bottom of the page
I'm trying to set the java.library.path system setting for my Bioclipse manager/Eclipse plugin.
Normally, if running java from command line, this variable should be set like so (According to what I've googled up):
java -Djava.library.path=/usr/local/lib/pl-5.7.15/lib/i686-linux/JavaClassName
so I have tried to add the line
-Djava.library.path="/usr/local/lib/pl-5.7.15/lib/i686-linux/"
JPL is a bi-directional Java/Prolog interface for SWI-Prolog, which I hope to be able to use for integrating Blipkit into Bioclipse, so I'm happy to have got it up running tonight. Below are some notes from the installation procedure.
NOTE: These are still rather incomplete notes about how to get this to work.